Add a locking mechanism to yaml_git storage

This stops multiple processes from updating the locale checkout of
a remote git repo simultaneously
diff --git a/reclass/storage/yaml_git/__init__.py b/reclass/storage/yaml_git/__init__.py
index 45cb6c0..a28079b 100644
--- a/reclass/storage/yaml_git/__init__.py
+++ b/reclass/storage/yaml_git/__init__.py
@@ -9,8 +9,11 @@
 
 import collections
 import distutils.version
+import errno
+import fcntl
 import fnmatch
 import os
+import time
 
 # Squelch warning on centos7 due to upgrading cffi
 # see https://github.com/saltstack/salt/pull/39871
@@ -50,6 +53,7 @@
         self.branch = None
         self.root = None
         self.cache_dir = None
+        self.lock_dir = None
         self.pubkey = None
         self.privkey = None
         self.password = None
@@ -59,6 +63,7 @@
         if 'repo' in dictionary: self.repo = dictionary['repo']
         if 'branch' in dictionary: self.branch = dictionary['branch']
         if 'cache_dir' in dictionary: self.cache_dir = dictionary['cache_dir']
+        if 'lock_dir' in dictionary: self.lock_dir = dictionary['lock_dir']
         if 'pubkey' in dictionary: self.pubkey = dictionary['pubkey']
         if 'privkey' in dictionary: self.privkey = dictionary['privkey']
         if 'password' in dictionary: self.password = dictionary['password']
@@ -72,8 +77,31 @@
         return '<{0}: {1} {2} {3}>'.format(self.__class__.__name__, self.repo, self.branch, self.root)
 
 
-class GitRepo(object):
+class LockFile():
+    def __init__(self, file):
+        self._file = file
 
+    def __enter__(self):
+        self._fd = open(self._file, 'w+')
+        start = time.time()
+        while True:
+            if (time.time() - start) > 120:
+                raise IOError('Timeout waiting to lock file: {0}'.format(self._file))
+            try:
+                fcntl.flock(self._fd, fcntl.LOCK_EX | fcntl.LOCK_NB)
+                break
+            except IOError as e:
+                # raise on unrelated IOErrors
+                if e.errno != errno.EAGAIN:
+                    raise
+                else:
+                    time.sleep(0.1)
+
+    def __exit__(self, type, value, traceback):
+        self._fd.close()
+
+
+class GitRepo(object):
     def __init__(self, uri, node_name_mangler, class_name_mangler):
         if pygit2 is None:
             raise errors.MissingModuleError('pygit2')
@@ -85,11 +113,18 @@
             self.cache_dir = '{0}/{1}/{2}'.format(os.path.expanduser("~"), '.reclass/cache/git', self.name)
         else:
             self.cache_dir = '{0}/{1}'.format(uri.cache_dir, self.name)
-
+        if uri.lock_dir is None:
+            self.lock_file = '{0}/{1}/{2}'.format(os.path.expanduser("~"), '.reclass/cache/lock', self.name)
+        else:
+            self.lock_file = '{0}/{1}'.format(uri.lock_dir, self.name)
+        lock_dir = os.path.dirname(self.lock_file)
+        if not os.path.exists(lock_dir):
+            os.makedirs(lock_dir)
         self._node_name_mangler = node_name_mangler
         self._class_name_mangler = class_name_mangler
-        self._init_repo(uri)
-        self._fetch()
+        with LockFile(self.lock_file):
+            self._init_repo(uri)
+            self._fetch()
         self.branches = self.repo.listall_branches()
         self.files = self.files_in_repo()
 
@@ -99,10 +134,7 @@
         else:
             os.makedirs(self.cache_dir)
             self.repo = pygit2.init_repository(self.cache_dir, bare=True)
-
-        if not self.repo.remotes:
             self.repo.create_remote('origin', self.url)
-
         if 'ssh' in self.transport:
             if '@' in self.url:
                 user, _, _ = self.url.partition('@')
@@ -130,7 +162,6 @@
         if self.credentials is not None:
             origin.credentials = self.credentials
         fetch_results = origin.fetch(**fetch_kwargs)
-
         remote_branches = self.repo.listall_branches(pygit2.GIT_BRANCH_REMOTE)
         local_branches = self.repo.listall_branches()
         for remote_branch_name in remote_branches:
@@ -208,8 +239,8 @@
                     ret[node_name] = file
         return ret
 
-class ExternalNodeStorage(ExternalNodeStorageBase):
 
+class ExternalNodeStorage(ExternalNodeStorageBase):
     def __init__(self, nodes_uri, classes_uri, compose_node_name):
         super(ExternalNodeStorage, self).__init__(STORAGE_NAME, compose_node_name)
         self._repos = dict()